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Single Cell Screen Qc

Agent skill
1 skill

Qualify a single-cell Perturb-seq screen's no-phenotype calls with karyon — flag perturbations called "no effect" where the guide never actually knocked the target down (a silent failure), so the null is an artifact, not biology. Use for Perturb-seq QC, single-cell CRISPR screen silent-failure / false-negative qualification, on-target knockdown reliability, low-cell-count power checks, or deciding whether a "no-phenotype" perturbation is a true negative or just a failed knockdown.

Install with
Claude CodeCodexCursorGitHub CopilotGemini CLI

Supported by the Atlas install prompt. Skill-specific requirements vary.

Skill stats

Skills1CategoryScience & researchStars0

About this skill

Qualify a single-cell Perturb-seq screen's no-phenotype calls with karyon — flag perturbations called "no effect" where the guide never actually knocked the target down (a silent failure), so the null is an artifact, not biology. Use for Perturb-seq QC, single-cell CRISPR screen silent-failure / false-negative qualification, on-target knockdown reliability, low-cell-count power checks, or deciding whether a "no-phenotype" perturbation is a true negative or just a failed knockdown.

Quick start

  1. Copy the install prompt. Use the green button above this README.
  2. Send it to your agent. Paste it into your coding agent’s chat and send.
  3. Review the setup. Your agent checks the skill’s instructions, requirements, and installation scope.
Review, license & listing details
Review the source before using this skill

This is an imported listing. We haven’t certified its safety, license, or compatibility. Skills may include executable scripts.

Automated security scan: Partial

Only SKILL.md was scanned. Supporting files and scripts were not checked. No safety grade has been assigned.

0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: a2f57edfedee786adb2c843f6f584a72f994c49378cfb8473a4cffe9c0080bf4

About scan coverage and limitations

About this listing

Category
Science & research
Reported license
Not specified
Listing language (estimated)
English
Review status
Not individually reviewed
Agent compatibility
Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.
Single Cell Screen Qc | Agent Skills Atlas