Deterministic developability/liability gate for GENERATED antibody Fv sequences (e.g. an AlphaFold-Multimer / RFdiffusion+ProteinMPNN designed binder, or an antibody language model) with karyon. Use AFTER designing an antibody/binder and BEFORE expressing or advancing it — answers "is this Fv developable, or does it carry a liability that makes it undruggable?" with a pass/fail verdict and legible per-reason explanations (an unpaired cysteine, an N-glycosylation sequon in a CDR, an extreme CDR-H3 length or isoelectric point — and, disclosed, the deamidation/isomerization/oxidation hotspots, fragmentation sites, and hydrophobicity/charge proxies even approved antibodies carry). Pure stdlib — no GPU, no network, no numpy. Input is the VH (+VL) amino-acid sequence; single-domain VHH/nanobodies are supported.
Install with
Claude CodeCodexCursorGitHub CopilotGemini CLI
Supported by the Atlas install prompt. Skill-specific requirements vary.
Skill stats
Skills1CategoryGeneralStars0
About this skill
Deterministic developability/liability gate for GENERATED antibody Fv sequences (e.g. an AlphaFold-Multimer / RFdiffusion+ProteinMPNN designed binder, or an antibody language model) with karyon. Use AFTER designing an antibody/binder and BEFORE expressing or advancing it — answers "is this Fv developable, or does it carry a liability that makes it undruggable?" with a pass/fail verdict and legible per-reason explanations (an unpaired cysteine, an N-glycosylation sequon in a CDR, an extreme CDR-H3 length or isoelectric point — and, disclosed, the deamidation/isomerization/oxidation hotspots, fragmentation sites, and hydrophobicity/charge proxies even approved antibodies carry). Pure stdlib — no GPU, no network, no numpy. Input is the VH (+VL) amino-acid sequence; single-domain VHH/nanobodies are supported.
Quick start
Copy the install prompt. Use the green button above this README.
Send it to your agent. Paste it into your coding agent’s chat and send.
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Deterministic developability/liability gate for GENERATED antibody Fv sequences (e.g. an AlphaFold-Multimer / RFdiffusion+ProteinMPNN designed binder, or an antibody language model) with karyon. Use AFTER designing an antibody/binder and BEFORE expressing or advancing it — answers "is this Fv developable, or does it carry a liability that makes it undruggable?" with a pass/fail verdict and legible per-reason explanations (an unpaired cysteine, an N-glycosylation sequon in a CDR, an extreme CDR-H3 length or isoelectric point — and, disclosed, the deamidation/isomerization/oxidation hotspots, fragmentation sites, and hydrophobicity/charge proxies even approved antibodies carry). Pure stdlib — no GPU, no network, no numpy. Input is the VH (+VL) amino-acid sequence; single-domain VHH/nanobodies are supported.
About this listing
Category
General
Reported license
Not specified
Listing language (estimated)
English
Review status
Not individually reviewed
Agent compatibility
Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.