Compose a new marimo notebook in the prx repo by reusing @app.function helpers from the existing notebook catalog (notebooks/nb01.py onward) to answer a PROSPECT chemical-genetics question end-to-end - e.g. "pull the Bond 2025 sGR table and look at the shape", "find compounds with similar PCL profiles to X", "annotate hits with target/MOA from the reference set", "compare CGI profile against the 437-compound reference". Trigger whenever the user asks for a notebook, analysis, figure, or vignette that touches PROSPECT CGI profiles, sGR tables, PCL similarity, MOA inference, Figshare/Dryad data from Bond et al. 2025, or compound/mutant metadata - even if they don't explicitly say "marimo" or "reuse the catalog". Use this instead of writing standalone analysis code from scratch, and instead of duplicating helpers that already exist in the catalog.
Install with
Claude CodeCodexCursorGitHub CopilotGemini CLI
Supported by the Atlas install prompt. Skill-specific requirements vary.
Skill stats
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About this skill
Compose a new marimo notebook in the prx repo by reusing @app.function helpers from the existing notebook catalog (notebooks/nb01.py onward) to answer a PROSPECT chemical-genetics question end-to-end - e.g. "pull the Bond 2025 sGR table and look at the shape", "find compounds with similar PCL profiles to X", "annotate hits with target/MOA from the reference set", "compare CGI profile against the 437-compound reference". Trigger whenever the user asks for a notebook, analysis, figure, or vignette that touches PROSPECT CGI profiles, sGR tables, PCL similarity, MOA inference, Figshare/Dryad data from Bond et al. 2025, or compound/mutant metadata - even if they don't explicitly say "marimo" or "reuse the catalog". Use this instead of writing standalone analysis code from scratch, and instead of duplicating helpers that already exist in the catalog.
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Compose a new marimo notebook in the prx repo by reusing @app.function helpers from the existing notebook catalog (notebooks/nb01_*.py onward) to answer a PROSPECT chemical-genetics question end-to-end - e.g. "pull the Bond 2025 sGR table and look at the shape", "find compounds with similar PCL profiles to X", "annotate hits with target/MOA from the reference set", "compare CGI profile against the 437-compound reference". Trigger whenever the user asks for a notebook, analysis, figure, or vignette that touches PROSPECT CGI profiles, sGR tables, PCL similarity, MOA inference, Figshare/Dryad data from Bond et al. 2025, or compound/mutant metadata - even if they don't explicitly say "marimo" or "reuse the catalog". Use this instead of writing standalone analysis code from scratch, and instead of duplicating helpers that already exist in the catalog.
About this listing
Category
Sales
Reported license
BSD-3-Clause
Listing language (estimated)
English
Review status
Not individually reviewed
Agent compatibility
Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.
Claude Code
Codex
Cursor
GitHub Copilot
Gemini CLI