Bio Read Qc Contamination Screening

About this skill

Detect sample contamination and cross-species reads using FastQ Screen. Screen reads against multiple reference genomes to identify bacterial, viral, adapter, or sample s

Quick start

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Installation guide →

Review, license & listing details

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Automated security scan: Partial

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0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: 2f03339754f169c52b45b75b842685243b6998e2ad4b4bf9ab6c42a11208e2e7

About scan coverage and limitations

Original listing metadata

Original name

bio-read-qc-contamination-screening

Original description

Detect sample contamination and cross-species reads using FastQ Screen. Screen reads against multiple reference genomes to identify bacterial, viral, adapter, or sample s — from bg-szy/TOP-SKILLS

About this listing

Category: Science & research
Reported license: Not specified
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.