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Spectral Embedding Dimension Reduction Parameters

Agent skill
1 skill

Use when after generating a tile matrix or feature count matrix from single-cell ATAC-seq, RNA-seq, Hi-C, or methylation data, before clustering or UMAP visualization, when you need unsupervised dimension reduction that scales to millions of cells and is agnostic to the underlying data modality.

Install with
Claude CodeCodexCursorGitHub CopilotGemini CLI

Supported by the Atlas install prompt. Skill-specific requirements vary.

Skill stats

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About this skill

Use when after generating a tile matrix or feature count matrix from single-cell ATAC-seq, RNA-seq, Hi-C, or methylation data, before clustering or UMAP visualization, when you need unsupervised dimension reduction that scales to millions of cells and is agnostic to the underlying data modality.

Quick start

  1. Copy the install prompt. Use the green button above this README.
  2. Send it to your agent. Paste it into your coding agent’s chat and send.
  3. Review the setup. Your agent checks the skill’s instructions, requirements, and installation scope.
Review, license & listing details
Review the source before using this skill

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0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: 35e6bf4a21361b8c866e22daf5a914b8fa39744bf6107ab1eaed7cc1783b8961

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About this listing

Category
General
Reported license
Apache-2.0
Listing language (estimated)
English
Review status
Not individually reviewed
Agent compatibility
Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.