Eggnog Run | Agent Skills Atlas

About this skill

Run eggNOG-mapper on genome protein FASTA files to generate functional annotations (COG, GO, KEGG, EC, PFAMs). Reads genomes from cyanobacteriagenomes.csv, skips already-annotated strains unless --force is given. Results are written to cache/ /genomes/ /eggnog/.

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Review, license & listing details

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This is an imported listing. We haven’t certified its safety, license, or compatibility. Skills may include executable scripts.

Automated security scan: Partial

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0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: d14a91f0b0b6f8f11e1939420eda02e9c2ce53c7e0fa9d397ba50af07cd1f7cd

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Original listing metadata

Original name

eggnog-run

Original description

Run eggNOG-mapper on genome protein FASTA files to generate functional annotations (COG, GO, KEGG, EC, PFAMs). Reads genomes from cyanobacteria_genomes.csv, skips already-annotated strains unless --force is given. Results are written to cache/<organism>/genomes/<strain>/eggnog/.

About this listing

Category: Science & research
Reported license: MIT
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.