Back to directory

Plotting

Agent skill
1 skill

Publication-grade plotting helpers (R + Python) with opinionated lab defaults. Ships pavlabheatmap (wraps pheatmap / seaborn.heatmap; diverging amber-orange→black→sky-blue palette centred at zero, black-body sequential alternate, no clustering by default, auto-hides labels when too many to read), plus distributional helpers pavlabscatter, pavlabdensity (KDE / histogram / violin), pavlabstripchart (strip or swarm — lab default for showing data), and pavlabboxplot (used sparingly; bakes in raw points + mean ± SE). Use for heatmaps (expression, correlation, any matrix), scatter, density, stripcharts, or any "lab-style figure" / "publication-quality figure" request.

Install with
Claude CodeCodexCursorGitHub CopilotGemini CLI

Supported by the Atlas install prompt. Skill-specific requirements vary.

Skill stats

Skills1CategoryScience & researchStars0

About this skill

Publication-grade plotting helpers (R + Python) with opinionated lab defaults. Ships pavlabheatmap (wraps pheatmap / seaborn.heatmap; diverging amber-orange→black→sky-blue palette centred at zero, black-body sequential alternate, no clustering by default, auto-hides labels when too many to read), plus distributional helpers pavlabscatter, pavlabdensity (KDE / histogram / violin), pavlabstripchart (strip or swarm — lab default for showing data), and pavlabboxplot (used sparingly; bakes in raw points + mean ± SE). Use for heatmaps (expression, correlation, any matrix), scatter, density, stripcharts, or any "lab-style figure" / "publication-quality figure" request.

Quick start

  1. Copy the install prompt. Use the green button above this README.
  2. Send it to your agent. Paste it into your coding agent’s chat and send.
  3. Review the setup. Your agent checks the skill’s instructions, requirements, and installation scope.
Review, license & listing details
Review the source before using this skill

This is an imported listing. We haven’t certified its safety, license, or compatibility. Skills may include executable scripts.

Automated security scan: Partial

Only SKILL.md was scanned. Supporting files and scripts were not checked. No safety grade has been assigned.

0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: 4c0d79a0654541fc161973e24c9878c3074012e5267fe48d004d4a50cf6c9123

About scan coverage and limitations

About this listing

Category
Science & research
Reported license
Not specified
Listing language (estimated)
English
Review status
Not individually reviewed
Agent compatibility
Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.