Generate a reproducible, runnable PyTorch training repo for a medical-imaging task — segmentation, classification, detection, image-to-image synthesis, self-supervised pretraining, or fine-tuning a pretrained backbone (transfer learning) — the missing middle link between choosing an architecture and validating a trained model. Emits a patient-level seed-locked split as an auditable artifact, a task-appropriate model, train and evaluate scripts that seed every RNG and infer under eval mode, a config, requirements, a reproducibility record, and a Methods stub with VERIFY placeholders (no fabricated numbers). Fine-tuning mode adds a frozen-then-unfrozen schedule, discriminative learning rates, and a pretrained-weight provenance record. The reproducibility guarantees hold by construction, so the build is leakage-safe before any training runs. Integrates with MONAI, nnU-Net, TorchIO, timm, and torchvision — it does not reimplement them.
Install with
Claude CodeCodexCursorGitHub CopilotGemini CLI
Supported by the Atlas install prompt. Skill-specific requirements vary.
Skill stats
Skills1CategoryEngineeringStars0
About this skill
Generate a reproducible, runnable PyTorch training repo for a medical-imaging task — segmentation, classification, detection, image-to-image synthesis, self-supervised pretraining, or fine-tuning a pretrained backbone (transfer learning) — the missing middle link between choosing an architecture and validating a trained model. Emits a patient-level seed-locked split as an auditable artifact, a task-appropriate model, train and evaluate scripts that seed every RNG and infer under eval mode, a config, requirements, a reproducibility record, and a Methods stub with VERIFY placeholders (no fabricated numbers). Fine-tuning mode adds a frozen-then-unfrozen schedule, discriminative learning rates, and a pretrained-weight provenance record. The reproducibility guarantees hold by construction, so the build is leakage-safe before any training runs. Integrates with MONAI, nnU-Net, TorchIO, timm, and torchvision — it does not reimplement them.
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Generate a reproducible, runnable PyTorch training repo for a medical-imaging task — segmentation, classification, detection, image-to-image synthesis, self-supervised pretraining, or fine-tuning a pretrained backbone (transfer learning) — the missing middle link between choosing an architecture and validating a trained model. Emits a patient-level seed-locked split as an auditable artifact, a task-appropriate model, train and evaluate scripts that seed every RNG and infer under eval mode, a config, requirements, a reproducibility record, and a Methods stub with VERIFY placeholders (no fabricated numbers). Fine-tuning mode adds a frozen-then-unfrozen schedule, discriminative learning rates, and a pretrained-weight provenance record. The reproducibility guarantees hold by construction, so the build is leakage-safe before any training runs. Integrates with MONAI, nnU-Net, TorchIO, timm, and torchvision — it does not reimplement them.
About this listing
Category
Engineering
Reported license
Not specified
Listing language (estimated)
English
Review status
Not individually reviewed
Agent compatibility
Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.
Claude Code
Codex
Cursor
GitHub Copilot
Gemini CLI