Claude Code
Codex
Cursor
GitHub Copilot
Gemini CLIAbout this skill
Use when user has alignment issues between FastSurfer outputs and other neuroimaging data — Mesh sits in wrong location, fixed 17.5mm offset, 90° rotation, voxel-grid mismatches, or NIfTI-vs-MGZ-affine confusion. Triggers on "alignment off", "17.5mm offset", "tkRAS bug", "scanner-RAS vs tkRAS", "FastSurfer mesh in wrong place", "vox2rastkr", "voxel grid mismatch", "cerebellum 1mm vs orig 0.7mm", "FastSurfer vs FSL alignment".
Quick start
- Copy the install prompt. Use the green button above this README.
- Send it to your agent. Paste it into your coding agent’s chat and send.
- Review the setup. Your agent checks the skill’s instructions, requirements, and installation scope.
Review, license & listing details
This is an imported listing. We haven’t certified its safety, license, or compatibility. Skills may include executable scripts.
Only SKILL.md was scanned. Supporting files and scripts were not checked. No safety grade has been assigned.
0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1
Content SHA-256: d4d4ded10ca987bb6876f75535156221bcc230ca240b2e5ba7f409d71861ae88
About this listing
- Category
- Engineering
- Reported license
- Not specified
- Listing language (estimated)
- English
- Review status
- Not individually reviewed
- Agent compatibility
- Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.