Bio Gatk Variant Calling | Agent Skills Atlas

About this skill

Variant calling with GATK HaplotypeCaller following best practices. Covers germline SNP/indel calling, GVCF workflow for cohorts, joint genotyping, and variant quality sc

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Review, license & listing details

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Automated security scan: Partial

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0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: 34106baa0e57c59f5231d27ff00f1e4d4a4d80362cf9858f97e4d12bba46e532

About scan coverage and limitations

Original listing metadata

Original name

bio-gatk-variant-calling

Original description

Variant calling with GATK HaplotypeCaller following best practices. Covers germline SNP/indel calling, GVCF workflow for cohorts, joint genotyping, and variant quality sc — from bg-szy/TOP-SKILLS

About this listing

Category: General
Reported license: Not specified
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.