Adjacency Matrix Sparsity Analysis

About this skill

Use when immediately after calling squidpy.gr.spatialneighbors() or similar spatial graph construction methods on an AnnData object. It is essential when validating that the computed spatial graph has been correctly stored in adata.

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Original listing metadata

Original name

adjacency-matrix-sparsity-analysis

Original description

Use when immediately after calling squidpy.gr.spatial_neighbors() or similar spatial graph construction methods on an AnnData object. It is essential when validating that the computed spatial graph has been correctly stored in adata.

About this listing

Category: General
Reported license: Apache-2.0
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.