Claude Code
Codex
Cursor
GitHub Copilot
Gemini CLIAbout this skill
Deterministic physical-validity gate for co-folding model output (protein + ligand predicted in one frame, e.g. Boltz-2, AlphaFold-3, Chai-1) with karyon. Use AFTER predicting a protein-ligand complex and BEFORE trusting the pose — it answers "is this pose physically valid?" with a pass/fail verdict and legible per-reason explanations (ligand-protein clash, volume overlap, out-of-pocket placement, plus the ligand's own bond/angle/ring/strain geometry). No GPU required.
Quick start
- Copy the install prompt. Use the green button above this README.
- Send it to your agent. Paste it into your coding agent’s chat and send.
- Review the setup. Your agent checks the skill’s instructions, requirements, and installation scope.
Review, license & listing details
This is an imported listing. We haven’t certified its safety, license, or compatibility. Skills may include executable scripts.
Only SKILL.md was scanned. Supporting files and scripts were not checked. No safety grade has been assigned.
0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1
Content SHA-256: 6d41f5812959e950699616e8e7eae07a6d2be7c27ae3c6ab7ebb939b6d839a4a
About this listing
- Category
- General
- Reported license
- Not specified
- Listing language (estimated)
- English
- Review status
- Not individually reviewed
- Agent compatibility
- Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.