Spatial Neighbor Graph Construction

About this skill

Use when when you have spatial molecular data (e.g., Visium, imaging-based cytometry) stored in an AnnData object with coordinate information in .

Copy the install prompt. Use the green button above this README.
Send it to your agent. Paste it into your coding agent’s chat and send.
Review the setup. Your agent checks the skill’s instructions, requirements, and installation scope.

Review, license & listing details

Review the source before using this skill

This is an imported listing. We haven’t certified its safety, license, or compatibility. Skills may include executable scripts.

Automated security scan: Partial

Only SKILL.md was scanned. Supporting files and scripts were not checked. No safety grade has been assigned.

0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: 1116ada0e2e1714ba34aa39c37afbda7c2588e2335f2ab24687121f079934e49

Original listing metadata

spatial-neighbor-graph-construction

Use when when you have spatial molecular data (e.g., Visium, imaging-based cytometry) stored in an AnnData object with coordinate information in .

Category: Science & research
Reported license: Apache-2.0
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.