Bio Duplicate Handling | Agent Skills Atlas

About this skill

Mark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis.

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Review, license & listing details

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Automated security scan: Partial

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0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: 6903fcf0d693a4322e84a4fdd9e5cdf2a10bec7481fc61d80e37786b16a67c84

About scan coverage and limitations

Original listing metadata

Original name

bio-duplicate-handling

Original description

Mark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis. — from bg-szy/TOP-SKILLS

About this listing

Category: General
Reported license: Not specified
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.