Compartment Strength Quantification

About this skill

Use when when you have a binned Hi-C cooler file, an associated eigenvector track (from prior eigscis calculation), and need to measure how strongly the genome is partitioned into active (A) and inactive (B) compartments.

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Original listing metadata

Original name

compartment-strength-quantification

Original description

Use when when you have a binned Hi-C cooler file, an associated eigenvector track (from prior eigs_cis calculation), and need to measure how strongly the genome is partitioned into active (A) and inactive (B) compartments.

About this listing

Category: Science & research
Reported license: Apache-2.0
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.