Bio Read Alignment Bowtie2 Alignment

About this skill

Align short reads using Bowtie2 with local or end-to-end modes. Supports gapped alignment. Use when aligning ChIP-seq, ATAC-seq, or when flexible alignment modes are need

Quick start

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Review, license & listing details

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0 potential findings · Scanned 11/4/2026 · Scanner 0.2.1

Content SHA-256: 1c6f3980a94c028e0ad8b981534e9853269c4ff7053d2a06a0b54f168ab8722a

About scan coverage and limitations

Original listing metadata

Original name

bio-read-alignment-bowtie2-alignment

Original description

Align short reads using Bowtie2 with local or end-to-end modes. Supports gapped alignment. Use when aligning ChIP-seq, ATAC-seq, or when flexible alignment modes are need — from bg-szy/TOP-SKILLS

About this listing

Category: General
Reported license: Not specified
Listing language (estimated): English
Review status: Not individually reviewed
Agent compatibility: Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.