Extract structured metadata from clinical trial Protocol and Statistical Analysis Plan (SAP) documents into a standardized JSON format. Use this skill whenever the user provides a Protocol, SAP, or both (as file paths or uploaded files) and wants to extract study design, endpoints, populations, visit schedules, analysis plans, or any structured trial metadata. Also trigger when the user mentions 'protocol review', 'SAP review', 'trial metadata', 'study design extraction', 'endpoint extraction', 'ADaM planning', 'TLG planning', or wants to prepare inputs for mock TLG shell generation. This skill is the first step in a Protocol->SAP->Metadata->TLG pipeline. Even if the user only provides one document (Protocol OR SAP), use this skill -- it handles partial inputs gracefully and flags what's missing.
Install with
Claude CodeCodexCursorGitHub CopilotGemini CLI
Supported by the Atlas install prompt. Skill-specific requirements vary.
Skill stats
Skills1CategoryData & analyticsStars0
About this skill
Extract structured metadata from clinical trial Protocol and Statistical Analysis Plan (SAP) documents into a standardized JSON format. Use this skill whenever the user provides a Protocol, SAP, or both (as file paths or uploaded files) and wants to extract study design, endpoints, populations, visit schedules, analysis plans, or any structured trial metadata. Also trigger when the user mentions 'protocol review', 'SAP review', 'trial metadata', 'study design extraction', 'endpoint extraction', 'ADaM planning', 'TLG planning', or wants to prepare inputs for mock TLG shell generation. This skill is the first step in a Protocol->SAP->Metadata->TLG pipeline. Even if the user only provides one document (Protocol OR SAP), use this skill -- it handles partial inputs gracefully and flags what's missing.
Quick start
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Extract structured metadata from clinical trial Protocol and Statistical Analysis Plan (SAP) documents into a standardized JSON format. Use this skill whenever the user provides a Protocol, SAP, or both (as file paths or uploaded files) and wants to extract study design, endpoints, populations, visit schedules, analysis plans, or any structured trial metadata. Also trigger when the user mentions 'protocol review', 'SAP review', 'trial metadata', 'study design extraction', 'endpoint extraction', 'ADaM planning', 'TLG planning', or wants to prepare inputs for mock TLG shell generation. This skill is the first step in a Protocol->SAP->Metadata->TLG pipeline. Even if the user only provides one document (Protocol OR SAP), use this skill -- it handles partial inputs gracefully and flags what's missing.
About this listing
Category
Data & analytics
Reported license
Not specified
Listing language (estimated)
English
Review status
Not individually reviewed
Agent compatibility
Atlas installation supports Claude Code, Codex, and Cursor. Skill-specific dependencies and features are checked during setup.
Claude Code
Codex
Cursor
GitHub Copilot
Gemini CLI